PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079155.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 215aa    MW: 24703.3 Da    PI: 7.7312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-101765655
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                     ++E++RR++++s +++L +llP+ +   psk  +   + Le+A +YIksLq
  XP_028079155.1 17 RIIEKNRRNHMKSLYSKLYSLLPNhD---PSKEaVPLPDRLEEAEKYIKSLQ 65
                    689*********************77...88888*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MASCHYTSSS TPKIERRIIE KNRRNHMKSL YSKLYSLLPN HDPSKEAVPL PDRLEEAEKY  60
IKSLQMRLEK YKEKKETLLG RKRSHSCITD FKQALKSPQI EIREMGPAVN VVLISGQEDK  120
FIFHEIIRLI HEEGAEVVNA SFSVVGNSIR HVVHAKIGEL APKFEAARVS NRLREFVNGS  180
ISDVESQSES LEFEIQPDMW EFEIPQILPL GVYSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-17bHLH family protein