PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079181.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 314aa    MW: 35008.1 Da    PI: 9.2989
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079181.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.51.3e-07255297343
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                      +W++ Ed  l++a k ++++   +W++Ia+ ++ g++  +c  r
   XP_028079181.1 255 NWSAGEDIALLNALKTFPKEvtmRWEKIAAAVP-GKSKAECMKR 297
                      8********************************.*******876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEFLDEESRP RFLFQSRSRP PPSSELQTLD LHKPSLFISF SLSLLLFFLS LFFLQSEPLK  60
SILFWFALSL LLGPLAPSSV TGGDIRVGLG KLLDPPPPQT DDPDRDDPKK KTPNRRSRAR  120
KNEDLGFIQA PTIVEGSENV ENSRHSSQYV GNKSVIEGGE EEWNEGDDEL LKKLLVKHPV  180
GKPKRWEAIA EGFQGRYGVE TVIKMAKSMG ERKMSDADSY ARFLKARKPV DKRVEAEIEG  240
VMESGEVKTQ TGGVNWSAGE DIALLNALKT FPKEVTMRWE KIAAAVPGKS KAECMKRVAG  300
LKKDFRSSKA SAEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.12e-56MYB_related family protein