PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079227.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 459aa MW: 50287.7 Da PI: 6.5277

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.7	6.6e-06	338	376	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_028079227.1 338 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 376 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MADEFQIGSG NWWDSNSSRN RFDSGASPPS SSALSSVGSF GWPTEIVDLK ARSSMDSVSV 60 SGSSMVFHDT QKMPGQDSGG GDSGSVLVDP SLQMMRLGLS AQAMDWNQTL LRGGGKADSF 120 RPVLQDDLRS TASFQQETGI GSSQGQWRQK IYSGSSDDSS VTANRGFSLD QPQFDSVVTC 180 QGLATSFQID QISYGSPSTI LHGVLGSDSQ QQQQQSDFEN RPMNYPYPPS FGLNSDELLP 240 NSWSKYSQFL RTSPPKQQPH SQLQFSNNTP FWNATAAAMN DVRPSFFPPL QPPFPPPTFD 300 EKPKITSEVR EAKKSSGSEA SNKRPRNETT SPLPPFKVRK EKMGDRITAL QQLVSPFGKT 360 DTASVLSEAI EYIKFLHDQV NTIYQAFGSP YMKSGGSIQH QKTFSILIAQ KSEKSKDPEG 420 AKQDLRSRGL CLVPVSSTYP VTHETTVDFW GPTFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MADEFQIGSG NWWDSNSSRN RFDSGASPPS SSALSSVGSF GWPTEIVDLK ARSSMDSVSV  60
SGSSMVFHDT QKMPGQDSGG GDSGSVLVDP SLQMMRLGLS AQAMDWNQTL LRGGGKADSF  120
RPVLQDDLRS TASFQQETGI GSSQGQWRQK IYSGSSDDSS VTANRGFSLD QPQFDSVVTC  180
QGLATSFQID QISYGSPSTI LHGVLGSDSQ QQQQQSDFEN RPMNYPYPPS FGLNSDELLP  240
NSWSKYSQFL RTSPPKQQPH SQLQFSNNTP FWNATAAAMN DVRPSFFPPL QPPFPPPTFD  300
EKPKITSEVR EAKKSSGSEA SNKRPRNETT SPLPPFKVRK EKMGDRITAL QQLVSPFGKT  360
DTASVLSEAI EYIKFLHDQV NTIYQAFGSP YMKSGGSIQH QKTFSILIAQ KSEKSKDPEG  420
AKQDLRSRGL CLVPVSSTYP VTHETTVDFW GPTFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	3e-62	bHLH family protein