PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079436.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 312aa    MW: 34373.1 Da    PI: 7.6856
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.3e-10225268755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_028079436.1 225 IAAKNRRERISERLKVLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 268
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MALAKDPKPS QMGLVQSSTY YNNVFGIPSS SIQPSNQSSP ELYVFDDHHK APPPPMSRSS  60
SLSSSNGYAT AYQPAETHSV IDFKTSGINS FMHNNNSGSF LSFEQNDQQD DYSIWEDNLI  120
HGYRHDHQRL SQDFNCVQSA STYGGMGSAL KENPHGGETF GWPESEANAN ATINGTIQEV  180
GAQETCFNKR PHAGESMQAL KRQCSGSATR KAKPKSTPSK DPQSIAAKNR RERISERLKV  240
LQELVPNGSK VDLVTMLEKA ISYVKFLQLQ VKVLATDEFW PVQGGKAPDI SQVKEAIDAI  300
LSTQKDRNSR SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.12e-61bHLH family protein