PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079527.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 212aa    MW: 23249.2 Da    PI: 7.7678
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.6e-14104155155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +g++ Ae+r+p +ng  +r+slg+  t e+A  a++ a+ +++g
  XP_028079527.1 104 TQYRGVRRRS-WGKYTAEVREPEKNG--ARVSLGTCETVEDAVVAYDIAAYRMRG 155
                     58*****887.**********98887..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MYAEGDFNAN FALLWSIRRD LLGEFEAPAI NSCNNPVEYC SVNNLFPCLT QNLGELSLKE  60
NHSEDIGRLP TPAVPSTTAA ATEMSNFPES VAPPVTAAVE SKGTQYRGVR RRSWGKYTAE  120
VREPEKNGAR VSLGTCETVE DAVVAYDIAA YRMRGSCTLL NFSLWINLGE PEPVHLTAKR  180
SSANRYLSSS SENGCSRKRR KKVVAKAEPA VV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-40ERF family protein