PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079533.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 260aa    MW: 28367.5 Da    PI: 8.1217
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.3e-05234256223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+ksF++   L++H +  H
  XP_028079533.1 234 PCKSCNKSFNSENALESHTKAkH 256
                     5*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEFWGLKVKS GQSRPVRPGK GKIVHLSQAC LGEVKKNKGS ESIYLYATVD GKKLVLGTLS  60
PEKFPQQQFD VVFDRKFVLS HNWKSGYVCL SGYRCDNPSN KPENDSAKNV EEGSSSTDDS  120
TSDFFTDSDE SYNTESESAE VETEDDDEEE EAPKKVVLSK KRPAESATKT PGPDKKAKLV  180
TPQKSGIVLV FCFISTDAKK GSVHVATTHP EKQAGKTPGN QSKQPTPKSA GSNPCKSCNK  240
SFNSENALES HTKAKHSAEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.27e-36C2H2 family protein