PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079714.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 216aa    MW: 24109.2 Da    PI: 9.3584
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK45.81.2e-143680448
          RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                    ei l+d+ ++   +i+ AA +L+v+ ++LKr+CR yG +RWP Rk
  XP_028079714.1 36 EIPLDDILQNSRESIQVAADSLQVSRSTLKRACRGYGFPRWPPRK 80
                    6889999999**********************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MTQLDSSNQQ SMDALNNGSN SQKKGKTKRP KRVKIEIPLD DILQNSRESI QVAADSLQVS  60
RSTLKRACRG YGFPRWPPRK KNMVGSSQPS ESSPGVDHQQ IPQLSSDQPF SQASATVFHA  120
NPRNTVIRDA NVVTVKAKYI NDIIIKFPLS LSSGLVELQQ QIAKRLHLED GTYCVKYKDE  180
VDDLIVIPCD QNLQDYISNY TSSGSTIHCS KVVNYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.11e-12Nin-like family protein