PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079748.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 146aa    MW: 16876.3 Da    PI: 8.48
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.6e-1654101148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      + rWT+eEde+l ++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_028079748.1  54 KRRWTAEEDEILTKYIQANGEGSWRSMPKNAGLLRCGKSCRLRWINYL 101
                      579*****************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MILDKGQLLE TKQMFRDAGE QWPVIIPEEE IRRAAPGTKT EMGRAPCCEK VGLKRRWTAE  60
EDEILTKYIQ ANGEGSWRSM PKNAGLLRCG KSCRLRWINY LRSDLKRGNI SSEEEEIITK  120
LHSTLGNRLA MHEESSSRRK AYEDCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.19e-52MYB family protein