PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028079823.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 411aa MW: 45203.6 Da PI: 4.3901

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028079823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	120.3	1e-37	125	223	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 lfqrlw++eDei lLqG++d+++++g s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ +k+ sgke +f+++hdq +fe+sk XP_028079823.1 125 LFQRLWTDEDEIELLQGFLDYTNQRGGgnsSHHHDTTAFYDQIKSKLQLEFNKNQLVEKLRRLKKKYRNVLSKIGSGKEYVFKSPHDQATFEISK 219 79*********************987645555********************************************************* PP DUF573 94 kiWg 97 kiW XP_028079823.1 220 KIWS 223 *7 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MAFEDEHTVY GGEEDLDEDD DDESEDPPPD LDDDDEIEDE EEEDDDTSSS NLAPGDPPPP 60 PSSVAVTVAI APKPSPSTPT TATATATVAT VSLPDPKRQR IDDVTIAAVF EEKKPLAVLD 120 DSRRLFQRLW TDEDEIELLQ GFLDYTNQRG GGNSSHHHDT TAFYDQIKSK LQLEFNKNQL 180 VEKLRRLKKK YRNVLSKIGS GKEYVFKSPH DQATFEISKK IWSSAADRGG AGGGAGEEGG 240 LEDDESNPNP NPNANPNLFD HNSNGVVDPN SSEKKGSRSR KRSRVKIEEK HQFINQQQPQ 300 QQNATPIAAA TATSIPNLIE ETVRSCLSPL FKELLHNAMN GAGGSRGFGA VAALNPMPLS 360 FGSPAPLNFP GGDSMDEKWR KQQILELEVY SKRLELVQDQ IKSALEELRS I

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MAFEDEHTVY GGEEDLDEDD DDESEDPPPD LDDDDEIEDE EEEDDDTSSS NLAPGDPPPP  60
PSSVAVTVAI APKPSPSTPT TATATATVAT VSLPDPKRQR IDDVTIAAVF EEKKPLAVLD  120
DSRRLFQRLW TDEDEIELLQ GFLDYTNQRG GGNSSHHHDT TAFYDQIKSK LQLEFNKNQL  180
VEKLRRLKKK YRNVLSKIGS GKEYVFKSPH DQATFEISKK IWSSAADRGG AGGGAGEEGG  240
LEDDESNPNP NPNANPNLFD HNSNGVVDPN SSEKKGSRSR KRSRVKIEEK HQFINQQQPQ  300
QQNATPIAAA TATSIPNLIE ETVRSCLSPL FKELLHNAMN GAGGSRGFGA VAALNPMPLS  360
FGSPAPLNFP GGDSMDEKWR KQQILELEVY SKRLELVQDQ IKSALEELRS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	4e-52	GeBP family protein