PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028079966.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 247aa    MW: 28911.5 Da    PI: 8.1059
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028079966.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.32.3e-2774165191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY+ Y+++vGF++r++++++s ++++i++r+fvCskeg+r+++  ++e++ +  + + tr gC+a+l++  ++ gkw+++ +++eHnHel+p
  XP_028079966.1  74 EFYEMYGRRVGFTMRNNRTRRSLKDNSIIRRQFVCSKEGFRADKYAHRENR-SlpSMPATREGCNAMLRIAAKDGGKWVIYGFVKEHNHELNP 165
                     6******************************************99883333.2348999*******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MASTSDQGYN SNRICRRWLA ETFDGHDTAE DDLSDNVNGN DDIIKPSNEN LPLNLEPLEP  60
YIGMEFESAE EAREFYEMYG RRVGFTMRNN RTRRSLKDNS IIRRQFVCSK EGFRADKYAH  120
RENRSLPSMP ATREGCNAML RIAAKDGGKW VIYGFVKEHN HELNPSKVPP RRSHRVAFYE  180
DEKDKKIQEL TAELRVKKRL SVAYHDQLLS LMKDVEDHNE HLSTKVQFVL NNLKELDAKR  240
QELLRHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-46FAR1 family protein