PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080044.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 527aa MW: 61829.9 Da PI: 8.5901

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.5	3e-25	28	116	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+Y+ ++GFs+r++ +k+k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l vk+++ +g+++vt+++++HnH+l+ XP_028080044.1 28 FYNTYGGRIGFSIRRDFCRKNKFTNQLICRLLVCNKEGFRKVDKRD-PLAKNPRAETRTGCEARLYVKLDEgTGRFVVTNFKEKHNHDLV 116 9****************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MDMEPENDCA WKLKHGMTFD SEQSVYGFYN TYGGRIGFSI RRDFCRKNKF TNQLICRLLV 60 CNKEGFRKVD KRDPLAKNPR AETRTGCEAR LYVKLDEGTG RFVVTNFKEK HNHDLVSPEC 120 AHTLPSQRKI STTQAIELDL AAQSGLRLGQ SFELMGKEAG GRQCLGFTKL DQKNYLRTKR 180 QQSLTYEEVG NVLQYFKEKS LQNPSFFYAF QLDNEEQITN MFWADAQMIV DYAQFGDVVT 240 FDTTCKLNKE HRPFASFVGF SHHRETVIFG ATLLYDETAE SFVWLFENFL EAMSRKAPKT 300 LFSNQDAIMA KAIPIVMPDT SHRLYANQWK LEWAEMLDKY DVRENHWLKL TFVDYIRSDF 360 NLNEFFMHFK RVLYEKRCKE LEVGYALCQR LPKVKATIRM LIQMGNVYTK KIFEKFQNEY 420 FRSIESDIEA IEYGDARTIY TVVDVANKHA RKLKMGRDGS FSCNCTEFER EEILCCHSLK 480 VIRDILKMKE VPPQYILKRW TKQARAETVK DIKRNDIQVD VKFQQAL

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MDMEPENDCA WKLKHGMTFD SEQSVYGFYN TYGGRIGFSI RRDFCRKNKF TNQLICRLLV  60
CNKEGFRKVD KRDPLAKNPR AETRTGCEAR LYVKLDEGTG RFVVTNFKEK HNHDLVSPEC  120
AHTLPSQRKI STTQAIELDL AAQSGLRLGQ SFELMGKEAG GRQCLGFTKL DQKNYLRTKR  180
QQSLTYEEVG NVLQYFKEKS LQNPSFFYAF QLDNEEQITN MFWADAQMIV DYAQFGDVVT  240
FDTTCKLNKE HRPFASFVGF SHHRETVIFG ATLLYDETAE SFVWLFENFL EAMSRKAPKT  300
LFSNQDAIMA KAIPIVMPDT SHRLYANQWK LEWAEMLDKY DVRENHWLKL TFVDYIRSDF  360
NLNEFFMHFK RVLYEKRCKE LEVGYALCQR LPKVKATIRM LIQMGNVYTK KIFEKFQNEY  420
FRSIESDIEA IEYGDARTIY TVVDVANKHA RKLKMGRDGS FSCNCTEFER EEILCCHSLK  480
VIRDILKMKE VPPQYILKRW TKQARAETVK DIKRNDIQVD VKFQQAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-94	FAR1 family protein