PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080046.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 1021aa MW: 117330 Da PI: 9.98

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080046.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.8	3.2e-22	847	936	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +f n+Y+ ++ Fs+r++ +k+k +++ ++r +vC+keg+r+ +k++ +++traetrtgC+a+l vk+++ +g+++vt+++++HnH+l+ XP_028080046.1 847 DFHNTYGGRIEFSIRRDFCRKNKFTNQLICRFLVCNKEGFRKVDKRD-PLAKNTRAETRTGCEARLYVKLDEgTGRFVVTDFKEKHNHDLV 936 699***************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MATKRQRKNL LDSVNVNGVI QDEPGMIKRA VVRHFKLLFN EEWKNRPKLS GFFASINSTD 60 SAELLEAEFL EDEIWEAIKG CDGNKAPGPD GFNLQCIQKC WNIMKGEFVQ LMKEFHANGK 120 LAKGINSSFI TLIPKKENPV GLGDYRPISL ISSIYKIVAK ILSKRLRRVM PKIISEVQTA 180 FLRGRHIIDG VLIANEVVDL WKRSKKKGLI LKLDFEKAYD SVNWEFLYSM MKNFGFGEKW 240 VGWIKTCIST ARISVLVNGS PTSEFSPMKG LRQGDPLSPF LFNIVAEGLN ILLERAKEVG 300 LIRGVSAGPT ELKITHLQFA DDTIIFCEAE WEEVVAVKRI LRCFEVMSGL KINFHKSKVC 360 GVGVQDDIVQ VFAKKLNCLS QKLPMSYLGL PLGTNPRRKA AWKPVIDKFK SKLASWKRRY 420 LSFAGRLTLI KSVLSSLPVY FLSIFKLPVG IAKVLHKIQA NFLWGGSETR RKLHLISWKE 480 ICVNKNKGGL GVRNLGQVNE CLLVKWWWRY GNEEAALWKK VICSKYGGVG GRWCPLFISS 540 VGLSYTWRGI TSVAEGNIAL REFFWQNFRL VVGNGRRIHF WFDKWCHNQN LSVSFPRLFA 600 LSVEKDGKLV DFVHRRVSDS DWNLVFRRPL LAWEEEEVQK LNDFLQNAPR INEEMVDSCS 660 WVAHPSEEFT VASVWKWMEA SQGVDIAVTR CIWINLAPPK AQFLSWLAWR GRVKCYELLQ 720 KVGVLSPNAS SLCVFCKSEV ETVNHVFIHC HFTWKLWANL VNWWNYKWVS PGSVEGLLLS 780 WPEIKMKKKM LTVWKTLPVA VMWSVWRSRN DCVFNKLHFD MDMEPENDCA WKPKHGMTFD 840 SEQSVYDFHN TYGGRIEFSI RRDFCRKNKF TNQLICRFLV CNKEGFRKVD KRDPLAKNTR 900 AETRTGCEAR LYVKLDEGTG RFVVTDFKEK HNHDLVSPEC AHMLPSQRKI STTQAIELDL 960 AAQSDLRLGQ SIELMGKEAG GRQCLGFTKL DQKNYLRTKR QQSLAYGEVG NVLQYFKEKS 1020 L

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MATKRQRKNL LDSVNVNGVI QDEPGMIKRA VVRHFKLLFN EEWKNRPKLS GFFASINSTD  60
SAELLEAEFL EDEIWEAIKG CDGNKAPGPD GFNLQCIQKC WNIMKGEFVQ LMKEFHANGK  120
LAKGINSSFI TLIPKKENPV GLGDYRPISL ISSIYKIVAK ILSKRLRRVM PKIISEVQTA  180
FLRGRHIIDG VLIANEVVDL WKRSKKKGLI LKLDFEKAYD SVNWEFLYSM MKNFGFGEKW  240
VGWIKTCIST ARISVLVNGS PTSEFSPMKG LRQGDPLSPF LFNIVAEGLN ILLERAKEVG  300
LIRGVSAGPT ELKITHLQFA DDTIIFCEAE WEEVVAVKRI LRCFEVMSGL KINFHKSKVC  360
GVGVQDDIVQ VFAKKLNCLS QKLPMSYLGL PLGTNPRRKA AWKPVIDKFK SKLASWKRRY  420
LSFAGRLTLI KSVLSSLPVY FLSIFKLPVG IAKVLHKIQA NFLWGGSETR RKLHLISWKE  480
ICVNKNKGGL GVRNLGQVNE CLLVKWWWRY GNEEAALWKK VICSKYGGVG GRWCPLFISS  540
VGLSYTWRGI TSVAEGNIAL REFFWQNFRL VVGNGRRIHF WFDKWCHNQN LSVSFPRLFA  600
LSVEKDGKLV DFVHRRVSDS DWNLVFRRPL LAWEEEEVQK LNDFLQNAPR INEEMVDSCS  660
WVAHPSEEFT VASVWKWMEA SQGVDIAVTR CIWINLAPPK AQFLSWLAWR GRVKCYELLQ  720
KVGVLSPNAS SLCVFCKSEV ETVNHVFIHC HFTWKLWANL VNWWNYKWVS PGSVEGLLLS  780
WPEIKMKKKM LTVWKTLPVA VMWSVWRSRN DCVFNKLHFD MDMEPENDCA WKPKHGMTFD  840
SEQSVYDFHN TYGGRIEFSI RRDFCRKNKF TNQLICRFLV CNKEGFRKVD KRDPLAKNTR  900
AETRTGCEAR LYVKLDEGTG RFVVTDFKEK HNHDLVSPEC AHMLPSQRKI STTQAIELDL  960
AAQSDLRLGQ SIELMGKEAG GRQCLGFTKL DQKNYLRTKR QQSLAYGEVG NVLQYFKEKS  1020
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-26	FAR1 family protein