PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080101.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 846aa MW: 97065.5 Da PI: 7.3571

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.1	4.7e-26	88	190	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ te++ +r+ +t+Cka+++vk++ dgkw ++++e+ XP_028080101.1 88 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYEKSnrqrvrqgnkqeTENSTGRRSCAKTDCKACMHVKRRGDGKWIIHRFEK 182 5*************************************99998888999999987766666669999********************** PP FAR1 84 eHnHelap 91 eHnHel p XP_028080101.1 183 EHNHELLP 190 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MDIDLRLPSG EHDKEDEPNG IVNMLDGKDK LQNGEEGNGD MVDVGDELNT GDGGNMNSLP 60 ADMLVFKQDT NLEPLAGMEF ESHGGAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF 120 ACSRYGTKRE YEKSNRQRVR QGNKQETENS TGRRSCAKTD CKACMHVKRR GDGKWIIHRF 180 EKEHNHELLP AQAVSEQTRK MYAAMARQFA EYKSVVGLKN DSKNPFDKGR NLALEAGETK 240 SLLEFFTQMQ IANSNFFYAI DTGEDQRLKN LLWVDAKSRY DYINFSDVVS FDTTYIRNKY 300 KMPLALFIGV NQHYQFMLLG CALVGDESAA TFSWVMQTWL KAMGGQAPKV IITDQDRAMK 360 SAISEVFPST CHCFCLWHIL GKVSETFSHL LKQHENFIAK LEKCIYRSWT HEEFEKRWHK 420 LVGRFELKEN EWIQSLHEDC SHWSPTHMRD IFLAGMCTAQ RSESVNCFFD KYMHKKTTVQ 480 EFLKQYEAIL QDRYEEEAKA DSDTWNRQPA LKSPSPFEKH VSGLYTHAVF KKFQTEVLGA 540 VACHPKRERQ DETTITFRVQ DFEKNQDFIV TWNERKSEVS CICRLFEFKG FLCRHAMIVL 600 QICGLSTIPP QYILKRWTKD AKSRSLMGEA SEHVQSRVQR YNDLCQRAMK LGEEGSLSQE 660 SYNFALHALE DAFGNCVTVN NSNKNLVDAG TSATPGLLCI EEENQSRSMS KTNKKKNPTK 720 KRKVNLEQEV MTVGHQDSLQ QMDKLSSRPV NLDGYFGPQQ SMQGMVQLNL MAPTRDNYYG 780 NQQTIQGLGQ LNSIAPSHDG YYNTQPSMHG LGPMDFFRTP AAFTYSIREE PTLRSSQLHD 840 DASRHA

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MDIDLRLPSG EHDKEDEPNG IVNMLDGKDK LQNGEEGNGD MVDVGDELNT GDGGNMNSLP  60
ADMLVFKQDT NLEPLAGMEF ESHGGAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF  120
ACSRYGTKRE YEKSNRQRVR QGNKQETENS TGRRSCAKTD CKACMHVKRR GDGKWIIHRF  180
EKEHNHELLP AQAVSEQTRK MYAAMARQFA EYKSVVGLKN DSKNPFDKGR NLALEAGETK  240
SLLEFFTQMQ IANSNFFYAI DTGEDQRLKN LLWVDAKSRY DYINFSDVVS FDTTYIRNKY  300
KMPLALFIGV NQHYQFMLLG CALVGDESAA TFSWVMQTWL KAMGGQAPKV IITDQDRAMK  360
SAISEVFPST CHCFCLWHIL GKVSETFSHL LKQHENFIAK LEKCIYRSWT HEEFEKRWHK  420
LVGRFELKEN EWIQSLHEDC SHWSPTHMRD IFLAGMCTAQ RSESVNCFFD KYMHKKTTVQ  480
EFLKQYEAIL QDRYEEEAKA DSDTWNRQPA LKSPSPFEKH VSGLYTHAVF KKFQTEVLGA  540
VACHPKRERQ DETTITFRVQ DFEKNQDFIV TWNERKSEVS CICRLFEFKG FLCRHAMIVL  600
QICGLSTIPP QYILKRWTKD AKSRSLMGEA SEHVQSRVQR YNDLCQRAMK LGEEGSLSQE  660
SYNFALHALE DAFGNCVTVN NSNKNLVDAG TSATPGLLCI EEENQSRSMS KTNKKKNPTK  720
KRKVNLEQEV MTVGHQDSLQ QMDKLSSRPV NLDGYFGPQQ SMQGMVQLNL MAPTRDNYYG  780
NQQTIQGLGQ LNSIAPSHDG YYNTQPSMHG LGPMDFFRTP AAFTYSIREE PTLRSSQLHD  840
DASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein