PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080102.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 813aa MW: 94052.5 Da PI: 7.1558

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.9e-28	52	139	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk++GF++++++s++sk+++e+++++f Cs++g + e++ ++r+ ++++t+Cka+++vk++kdgkw+++++ ++HnHel p XP_028080102.1 52 SFYQDYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDGG---SSRRPSVKKTDCKASMHVKRRKDGKWYIHEFIKDHNHELLP 139 5**************************************999888...7788889*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
MSADMVDIVD KTHDRDGAIV DTPKKDDMGI EGDADFEPRN GIEFESHEAA YSFYQDYAKS 60 MGFTTSIKNS RRSKKSKEFI DAKFACSRYG VTPESDGGSS RRPSVKKTDC KASMHVKRRK 120 DGKWYIHEFI KDHNHELLPA LAYHFRIHRN IKLAEKNNID ILHAVSERTR KMYVEMSRQS 180 GGYQNVDILG DGTSYQSDKG RYLVLEEGDA RVMLEYFMHI QKENPHFFYA IDLNEEQRLR 240 NLFWVDAKSR NDYISFSDVV FFDMSYIKSN DKMPFAPFVG VNHHFQSMLL GCALVAGETK 300 STFVWVMKTW LRAMGGQAPK VIITDQEKAL TAAIEEVFPS ARHCFSLWHI LEKIPEALAH 360 VIKRHENFMG KFNKCIFKSL TDEQFDMRWW KMVSRFELQD DEWILSLYED RKKWVPTYMR 420 DMFLAGMSTT QRAESVNAFF DKYIHKKITL KEFVKQYGMI LQNRYEEEAI ADFDTWHKQP 480 ALKSPSPWEK QMSTVYTHTI FKKFQVEVLG VVGCHPRKES EDGTNVTFRV DDCEKEENYV 540 VTWDEAKSNV SCSCLLFEYK GFLCRHAMIV LQICGLSSIP FHYILKRWTK HATSRQSMDE 600 GTERIQTRVQ RYNDLCKRAI ELGEEGSVSE DRYNIAFRAL VESLKNCVDV NNRNAAESSG 660 NALCLREIEE EHQRSLAINT SKKKPANRKR KVQSEPEAMT VEPQDSLQQM DNLSSDGITL 720 NGYYGTQQNV QGLLQLNLME PPHDGYYVNQ QSMQGLGQLN SIAPNHDGFF GSQQGMHGLG 780 HLDFRPQSNF SYSLQDMPNL RSTQLHTDAK RHA

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

MSADMVDIVD KTHDRDGAIV DTPKKDDMGI EGDADFEPRN GIEFESHEAA YSFYQDYAKS  60
MGFTTSIKNS RRSKKSKEFI DAKFACSRYG VTPESDGGSS RRPSVKKTDC KASMHVKRRK  120
DGKWYIHEFI KDHNHELLPA LAYHFRIHRN IKLAEKNNID ILHAVSERTR KMYVEMSRQS  180
GGYQNVDILG DGTSYQSDKG RYLVLEEGDA RVMLEYFMHI QKENPHFFYA IDLNEEQRLR  240
NLFWVDAKSR NDYISFSDVV FFDMSYIKSN DKMPFAPFVG VNHHFQSMLL GCALVAGETK  300
STFVWVMKTW LRAMGGQAPK VIITDQEKAL TAAIEEVFPS ARHCFSLWHI LEKIPEALAH  360
VIKRHENFMG KFNKCIFKSL TDEQFDMRWW KMVSRFELQD DEWILSLYED RKKWVPTYMR  420
DMFLAGMSTT QRAESVNAFF DKYIHKKITL KEFVKQYGMI LQNRYEEEAI ADFDTWHKQP  480
ALKSPSPWEK QMSTVYTHTI FKKFQVEVLG VVGCHPRKES EDGTNVTFRV DDCEKEENYV  540
VTWDEAKSNV SCSCLLFEYK GFLCRHAMIV LQICGLSSIP FHYILKRWTK HATSRQSMDE  600
GTERIQTRVQ RYNDLCKRAI ELGEEGSVSE DRYNIAFRAL VESLKNCVDV NNRNAAESSG  660
NALCLREIEE EHQRSLAINT SKKKPANRKR KVQSEPEAMT VEPQDSLQQM DNLSSDGITL  720
NGYYGTQQNV QGLLQLNLME PPHDGYYVNQ QSMQGLGQLN SIAPNHDGFF GSQQGMHGLG  780
HLDFRPQSNF SYSLQDMPNL RSTQLHTDAK RHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein