PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080124.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 592aa MW: 66596.8 Da PI: 7.5706

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.4e-08	467	515	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 W+ E +lv++v +G g+W+ I r + +Rt ++k++w+++l XP_028080124.1 467 YWSLSEVSKLVEGVSVYGVGRWTEIKRLLFhssANRTSVDLKDKWRNLL 515 6**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MQKMSEDEQG EFKSRILING SKDGMTFNET VNMFGKNPAQ VVEDGSFFPA LEDEVIAVEN 60 LFAEPKCNAL GDDVLGFNSF SQHTCFNFEE CPTVGYGSIK TNNGTLDSNT NLSEKIKEEF 120 SDGVSGGTDA TVLDGKNNLI DTCEDYLLDT EFVDEASDFN PIKGPYVGNL NLESKSMVSG 180 GRGHGAEISE LATTSIPVLQ GTCQDSSLLD KMTIDELHEA FRNMFGRETT VTDEQWLKRH 240 LSFGLQNLLG PSNENEGKMI LSTSDLCSRR VSSPFTAVFN FKRKPRVQHV KRERHDNHVS 300 LKAISSEVRK AVLSFSELGE KQSVLDTRKR VRKPTRRYIE ESLEHNSRHQ KRSCVLSSTF 360 SRDKLLHNGS YKLHCHKGFE SKPFVSQKEP FKGACIQVPF GQPVHKGHLK KKVHESEGCE 420 DSKLLGSNID SDMESFSTES QDDVSEDDYS AGTKTQKGKS RRKHHMYWSL SEVSKLVEGV 480 SVYGVGRWTE IKRLLFHSSA NRTSVDLKDK WRNLLRASCP QLQSNRKVES RRKHTSQVIP 540 QSILRRVREL AAIYPYPRER KAQVMETDSP IPDKSTCDNL LPLSTAVKCS VR

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MQKMSEDEQG EFKSRILING SKDGMTFNET VNMFGKNPAQ VVEDGSFFPA LEDEVIAVEN  60
LFAEPKCNAL GDDVLGFNSF SQHTCFNFEE CPTVGYGSIK TNNGTLDSNT NLSEKIKEEF  120
SDGVSGGTDA TVLDGKNNLI DTCEDYLLDT EFVDEASDFN PIKGPYVGNL NLESKSMVSG  180
GRGHGAEISE LATTSIPVLQ GTCQDSSLLD KMTIDELHEA FRNMFGRETT VTDEQWLKRH  240
LSFGLQNLLG PSNENEGKMI LSTSDLCSRR VSSPFTAVFN FKRKPRVQHV KRERHDNHVS  300
LKAISSEVRK AVLSFSELGE KQSVLDTRKR VRKPTRRYIE ESLEHNSRHQ KRSCVLSSTF  360
SRDKLLHNGS YKLHCHKGFE SKPFVSQKEP FKGACIQVPF GQPVHKGHLK KKVHESEGCE  420
DSKLLGSNID SDMESFSTES QDDVSEDDYS AGTKTQKGKS RRKHHMYWSL SEVSKLVEGV  480
SVYGVGRWTE IKRLLFHSSA NRTSVDLKDK WRNLLRASCP QLQSNRKVES RRKHTSQVIP  540
QSILRRVREL AAIYPYPRER KAQVMETDSP IPDKSTCDNL LPLSTAVKCS VR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-43	MYB_related family protein