PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080193.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 565aa MW: 63750.8 Da PI: 8.1083

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.6	1.4e-08	440	488	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 W+ E +lv++v +G g+W+ I r + +Rt ++k++w+++l XP_028080193.1 440 YWSLSEVSKLVEGVSVYGVGRWTEIKRLLFhssANRTSVDLKDKWRNLL 488 6**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MRYGWPHRKV VEDGSFFPAL EDEVIAVENL FAEPKCNALG DDVLGFNSFS QHTCFNFEEC 60 PTVGYGSIKT NNGTLDSNTN LSEKIKEEVC LFFSDGVSGG TDATVLDGKN NLIDTCEDYL 120 LDTEFVDEAS DFNPIKGPYV GNLNLESKSM VSGGRGHGAE ISELATTSIP VLQGTCQDSS 180 LLDKMTIDEL HEAFRNMFGR ETTVTDEQWL KRHLSFGLQN LLGPSNENEG KMILSTSDLC 240 SRRVSSPFTA VFNFKRKPRV QHVKRERHDN HVSLKAISSE VRKAVLSFSE LGEKQSVLDT 300 RKRVRKPTRR YIEESLEHNS RHQKRSCVLS STFSRDKLLH NGSYKLHCHK GFESKPFVSQ 360 KEPFKGACIQ VPFGQPVHKG HLKKKVHESE GCEDSKLLGS NIDSDMESFS TESQDDVSED 420 DYSAGTKTQK GKSRRKHHMY WSLSEVSKLV EGVSVYGVGR WTEIKRLLFH SSANRTSVDL 480 KDKWRNLLRA SCPQLQSNRK VESRRKHTSQ VIPQSILRRV RELAAIYPYP RERKAQVMET 540 DSPIPDKSTC DNLLPLSTAV KCSVR

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MRYGWPHRKV VEDGSFFPAL EDEVIAVENL FAEPKCNALG DDVLGFNSFS QHTCFNFEEC  60
PTVGYGSIKT NNGTLDSNTN LSEKIKEEVC LFFSDGVSGG TDATVLDGKN NLIDTCEDYL  120
LDTEFVDEAS DFNPIKGPYV GNLNLESKSM VSGGRGHGAE ISELATTSIP VLQGTCQDSS  180
LLDKMTIDEL HEAFRNMFGR ETTVTDEQWL KRHLSFGLQN LLGPSNENEG KMILSTSDLC  240
SRRVSSPFTA VFNFKRKPRV QHVKRERHDN HVSLKAISSE VRKAVLSFSE LGEKQSVLDT  300
RKRVRKPTRR YIEESLEHNS RHQKRSCVLS STFSRDKLLH NGSYKLHCHK GFESKPFVSQ  360
KEPFKGACIQ VPFGQPVHKG HLKKKVHESE GCEDSKLLGS NIDSDMESFS TESQDDVSED  420
DYSAGTKTQK GKSRRKHHMY WSLSEVSKLV EGVSVYGVGR WTEIKRLLFH SSANRTSVDL  480
KDKWRNLLRA SCPQLQSNRK VESRRKHTSQ VIPQSILRRV RELAAIYPYP RERKAQVMET  540
DSPIPDKSTC DNLLPLSTAV KCSVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-43	MYB_related family protein