PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080221.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 528aa MW: 59470.6 Da PI: 6.7798

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.8	4.7e-14	334	380	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ErrRR++iN++f+ L +l+P+ K++K++iL +++Y+k+L+ XP_028080221.1 334 NHVLSERRRREKINKRFSVLGSLVPST-----SKVNKVSILDNTIKYLKDLE 380 78899*******************7.....6**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MASGGHHNQE GVPEDLRNQL AVAVRTIQWS YAIFWSISSR QPGLPGRTLA NGQPIWLCNA 60 HYADSKVFSR SLLAKSASIQ TVVCFPFLGG VVELGVTDLI LEDPGFIQHI KTSFLEIPYP 120 IVYEASDKDL IHATLDRDIL DDTNFNPIVG CEELNVCSPN DSSNKFGLNE ESFMVEGLND 180 EVSNCVHNSM SSSDCISQTL VSPKTVCPFL KGQNENDGFL LDLQEQNQMK PASTGLQDND 240 IHYQSVLSTL LKTSHQLILG PNVRNCNQES SFVRWKKCSF VGIQMPRIGT PQRLLKKVLF 300 EVAQMHSVFL LDSRENNGER DGLWRPQVDD IDSNHVLSER RRREKINKRF SVLGSLVPST 360 SKVNKVSILD NTIKYLKDLE RRVEELDSFK EVVEQEARTR RKPQDSAERT SDNYANNIKK 420 PLINKRKACD IGEIEPEINQ MVLKNSSNDS VTVSMIEKDV LIEVRCPWRE CLLLEIMDAI 480 SHLHLDSYSI QSTNTDGILS LTAKSKFKGS KVASARIIRQ ALQRVVRK

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MASGGHHNQE GVPEDLRNQL AVAVRTIQWS YAIFWSISSR QPGLPGRTLA NGQPIWLCNA  60
HYADSKVFSR SLLAKSASIQ TVVCFPFLGG VVELGVTDLI LEDPGFIQHI KTSFLEIPYP  120
IVYEASDKDL IHATLDRDIL DDTNFNPIVG CEELNVCSPN DSSNKFGLNE ESFMVEGLND  180
EVSNCVHNSM SSSDCISQTL VSPKTVCPFL KGQNENDGFL LDLQEQNQMK PASTGLQDND  240
IHYQSVLSTL LKTSHQLILG PNVRNCNQES SFVRWKKCSF VGIQMPRIGT PQRLLKKVLF  300
EVAQMHSVFL LDSRENNGER DGLWRPQVDD IDSNHVLSER RRREKINKRF SVLGSLVPST  360
SKVNKVSILD NTIKYLKDLE RRVEELDSFK EVVEQEARTR RKPQDSAERT SDNYANNIKK  420
PLINKRKACD IGEIEPEINQ MVLKNSSNDS VTVSMIEKDV LIEVRCPWRE CLLLEIMDAI  480
SHLHLDSYSI QSTNTDGILS LTAKSKFKGS KVASARIIRQ ALQRVVRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	344	ERRRRE
2	340	345	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-139	bHLH family protein