PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080226.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

DBB

Protein Properties

Length: 300aa MW: 33742.9 Da PI: 6.5481

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.9	1.7e-07	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +++ e++ fC ++ lCe C + H+ XP_028080226.1 4 QCDVCNKDEASVFCSADEAALCEGCDERVHH 34 7****99*****************974 PP
2	zf-B_box	31	5.1e-10	59	97	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39 + C+ ++e +++lfC++++ lC++C +Hk Ht+ XP_028080226.1 59 RPLCDICQERRAILFCQEDRAILCRECDIPIHKAneHTL 97 579*****************************8889987 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MKIQCDVCNK DEASVFCSAD EAALCEGCDE RVHHANKLAT KHIRFSLLLP SSSNQSESRP 60 LCDICQERRA ILFCQEDRAI LCRECDIPIH KANEHTLKHN RFLLTGVKLS CPSSSSSSSS 120 NGFDLPTYSH IKSSVISNQS SNPTSSIHYD KASLPSTNTT PCKANHDHDH HYRYVSQENS 180 VSLSTSSISE YLMETLPGWR VDDFLDPSCF PHGFCKFSNH DLDKGWYPFP SEDLVICVPQ 240 APIQFSHNTP LCPPQTGVIN GVFKGSEEEL DLMKFSRKWN EDGFTVPQIS PPLKKSRQFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-73	DBB family protein