PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080241.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 499aa MW: 54763.6 Da PI: 6.7809

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00063	392	424	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A+ YIk Lq XP_028080241.1 392 DKITALQQIVSPF-----GKTDTASVLGEAIGYIKFLQ 424 7888889988887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MPEECNETSI ATSPATLNWW PDLHVSSLSS WSSNTNTNNN NPWQPQNPNS NSSGEEDVSI 60 STSFTNASNQ SSLSVDLESS RHIVESASAN ELIGKTASDN QLWSHVLLSI GTSGELNNTQ 120 EIGHNNILSS KGLSTGMMFE PACDYLKKMD NSWEFTNPQS VINNFEKHFN GFNEGLIESE 180 RLNKLPSSLV NNWSIAPPDS EINSSIYRFS AQPDICHSKQ SVSNPTTFSG SINRNSGSYS 240 CYGHEMKVKD EHREIEYQLG LYNSILGDSN KYYYGLPDVP CNGTRSFGDA MSSNSFLSKP 300 IVGVHASKPS LRSLSLSDCK KQGIQASSHP TISTTSHTVT RSNGRGGQGI ASEGKKKRSE 360 DNSETPTKKP KHDTSSTLSS SKMQVTKVKL GDKITALQQI VSPFGKTDTA SVLGEAIGYI 420 KFLQEQVQMQ LLSNPYMKSN VNKMEPWGGL DRNERGGDVK VDLKSRGLCL VPISCTPQVC 480 RDNTGSDYWT PTYRGCLYR

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MPEECNETSI ATSPATLNWW PDLHVSSLSS WSSNTNTNNN NPWQPQNPNS NSSGEEDVSI  60
STSFTNASNQ SSLSVDLESS RHIVESASAN ELIGKTASDN QLWSHVLLSI GTSGELNNTQ  120
EIGHNNILSS KGLSTGMMFE PACDYLKKMD NSWEFTNPQS VINNFEKHFN GFNEGLIESE  180
RLNKLPSSLV NNWSIAPPDS EINSSIYRFS AQPDICHSKQ SVSNPTTFSG SINRNSGSYS  240
CYGHEMKVKD EHREIEYQLG LYNSILGDSN KYYYGLPDVP CNGTRSFGDA MSSNSFLSKP  300
IVGVHASKPS LRSLSLSDCK KQGIQASSHP TISTTSHTVT RSNGRGGQGI ASEGKKKRSE  360
DNSETPTKKP KHDTSSTLSS SKMQVTKVKL GDKITALQQI VSPFGKTDTA SVLGEAIGYI  420
KFLQEQVQMQ LLSNPYMKSN VNKMEPWGGL DRNERGGDVK VDLKSRGLCL VPISCTPQVC  480
RDNTGSDYWT PTYRGCLYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	8e-60	bHLH family protein