PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080244.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 807aa MW: 92140.7 Da PI: 8.4497

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.5	5.1e-14	37	123	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY +YAk+ GF + ++++ ++ge + C++ r+++++ + +++ +++ +Ckak++ +++kdg++++t+++leH+H+l+p XP_028080244.1 37 FYAKYAKHFGFAIAYGTQNYD-NDGELKYFGIECTRARMRRKRSEV--NPLEPSLSSKNDCKAKVRGSLQKDGTFKLTTVVLEHTHDLVP 123 9*************99997.8999*********9999876..9999*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MEGSNNPTQE GEEPESGEVE EPKQGMCFTS KQEVYAFYAK YAKHFGFAIA YGTQNYDNDG 60 ELKYFGIECT RARMRRKRSE VNPLEPSLSS KNDCKAKVRG SLQKDGTFKL TTVVLEHTHD 120 LVPSDSRHFA MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH 180 IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYKAF 240 GDVVTFDTTY LTNKYDMPFA PFVGVNHHGQ SILFGCGLLC NENTETFVWL FRAWLSCMSD 300 TPPNAIITDQ CKAMQNAIQI VFPQARHRWC LWHILKKIPE KLRACSQYES IKFALQKAVY 360 ESFTKNEFDE EWQAMIAKFG LHDNDWLGGL YDERHRWIPA YVKDMFWAGM STTQRSESMN 420 AFFDGYVNSK TTLKQFVEQY DNALRSKVEK EAKADFKSRN KLYDCLTMYA FEKQFRAAYT 480 NTKFKEVQVE MKRLLYCHAT LVEEKGSICT YHVKEAIPVG EQMKKVEFVV YCNSIECDIQ 540 CMCRWFEFRG IMCAHSLSVL LERSTYEVPD KYIVQRWRKD LERGYTCIPT TYTTYGVVLN 600 AKVHDNYHKT MDEIIEIASN DDAKHKVIQL GLIEIKDRVR QVEAGCASNL PPSTSGVPHS 660 TSTVQPSNTS PKTQAGRSST NASMTHKVLS PMVARRRGRP CTKRKVSKVD EIVNRLKGKN 720 KRASKVQGRK LNFASMDGMQ ASPCIDGTQE SMYVPAQGSP MQMVDNIGSG SVSHSRMVTN 780 ISSQSGPIGS KFIELNIDVD PNAPFYF

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MEGSNNPTQE GEEPESGEVE EPKQGMCFTS KQEVYAFYAK YAKHFGFAIA YGTQNYDNDG  60
ELKYFGIECT RARMRRKRSE VNPLEPSLSS KNDCKAKVRG SLQKDGTFKL TTVVLEHTHD  120
LVPSDSRHFA MNKRILTPVK RRLEINDEAG IGVARNFHSM VVEAGGFEAL TFDERDARNH  180
IDKARRLRLG VGDAESVAFY FHRMQQQNSN FYSEMDFDGE GRLRNLFWAD ARSRAAYKAF  240
GDVVTFDTTY LTNKYDMPFA PFVGVNHHGQ SILFGCGLLC NENTETFVWL FRAWLSCMSD  300
TPPNAIITDQ CKAMQNAIQI VFPQARHRWC LWHILKKIPE KLRACSQYES IKFALQKAVY  360
ESFTKNEFDE EWQAMIAKFG LHDNDWLGGL YDERHRWIPA YVKDMFWAGM STTQRSESMN  420
AFFDGYVNSK TTLKQFVEQY DNALRSKVEK EAKADFKSRN KLYDCLTMYA FEKQFRAAYT  480
NTKFKEVQVE MKRLLYCHAT LVEEKGSICT YHVKEAIPVG EQMKKVEFVV YCNSIECDIQ  540
CMCRWFEFRG IMCAHSLSVL LERSTYEVPD KYIVQRWRKD LERGYTCIPT TYTTYGVVLN  600
AKVHDNYHKT MDEIIEIASN DDAKHKVIQL GLIEIKDRVR QVEAGCASNL PPSTSGVPHS  660
TSTVQPSNTS PKTQAGRSST NASMTHKVLS PMVARRRGRP CTKRKVSKVD EIVNRLKGKN  720
KRASKVQGRK LNFASMDGMQ ASPCIDGTQE SMYVPAQGSP MQMVDNIGSG SVSHSRMVTN  780
ISSQSGPIGS KFIELNIDVD PNAPFYF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	699	709	RPCTKRKVSKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-124	FAR1 family protein