PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080300.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB_related

Protein Properties

Length: 561aa MW: 63141.1 Da PI: 7.7062

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.6	1.4e-08	436	484	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 W+ E +lv++v +G g+W+ I r + +Rt ++k++w+++l XP_028080300.1 436 YWSLSEVSKLVEGVSVYGVGRWTEIKRLLFhssANRTSVDLKDKWRNLL 484 6**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MDPKMVVEDG SFFPALEDEV IAVENLFAEP KCNALGDDVL GFNSFSQHTC FNFEECPTVG 60 YGSIKTNNGT LDSNTNLSEK IKEEVCLFFS DGVSGGTDAT VLDGKNNLID TCEDYLLDTE 120 FVDEASDFNP IKGPYVGNLN LESKSMVSGG RGHGAEISEL ATTSIPVLQG TCQDSSLLDK 180 MTIDELHEAF RNMFGRETTV TDEQWLKRHL SFGLQNLLGP SNENEGKMIL STSDLCSRRV 240 SSPFTAVFNF KRKPRVQHVK RERHDNHVSL KAISSEVRKA VLSFSELGEK QSVLDTRKRV 300 RKPTRRYIEE SLEHNSRHQK RSCVLSSTFS RDKLLHNGSY KLHCHKGFES KPFVSQKEPF 360 KGACIQVPFG QPVHKGHLKK KVHESEGCED SKLLGSNIDS DMESFSTESQ DDVSEDDYSA 420 GTKTQKGKSR RKHHMYWSLS EVSKLVEGVS VYGVGRWTEI KRLLFHSSAN RTSVDLKDKW 480 RNLLRASCPQ LQSNRKVESR RKHTSQVIPQ SILRRVRELA AIYPYPRERK AQVMETDSPI 540 PDKSTCDNLL PLSTAVKCSV R

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MDPKMVVEDG SFFPALEDEV IAVENLFAEP KCNALGDDVL GFNSFSQHTC FNFEECPTVG  60
YGSIKTNNGT LDSNTNLSEK IKEEVCLFFS DGVSGGTDAT VLDGKNNLID TCEDYLLDTE  120
FVDEASDFNP IKGPYVGNLN LESKSMVSGG RGHGAEISEL ATTSIPVLQG TCQDSSLLDK  180
MTIDELHEAF RNMFGRETTV TDEQWLKRHL SFGLQNLLGP SNENEGKMIL STSDLCSRRV  240
SSPFTAVFNF KRKPRVQHVK RERHDNHVSL KAISSEVRKA VLSFSELGEK QSVLDTRKRV  300
RKPTRRYIEE SLEHNSRHQK RSCVLSSTFS RDKLLHNGSY KLHCHKGFES KPFVSQKEPF  360
KGACIQVPFG QPVHKGHLKK KVHESEGCED SKLLGSNIDS DMESFSTESQ DDVSEDDYSA  420
GTKTQKGKSR RKHHMYWSLS EVSKLVEGVS VYGVGRWTEI KRLLFHSSAN RTSVDLKDKW  480
RNLLRASCPQ LQSNRKVESR RKHTSQVIPQ SILRRVRELA AIYPYPRERK AQVMETDSPI  540
PDKSTCDNLL PLSTAVKCSV R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	9e-44	MYB_related family protein