PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080315.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 214aa MW: 24904.7 Da PI: 5.6842

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.3e-19	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v ++G g+Wk I+++ g++R++k+c++rw++yl XP_028080315.1 9 KGSWTEEEDNLLRKYVDEYGQGNWKHIPSKSGLNRCRKSCRLRWLNYL 56 799*******************************************97 PP
2	Myb_DNA-binding	47.7	3.6e-15	62	107	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + +Ed+l++++++ lG++ W++Ia +++ gRt++++k++w++yl XP_028080315.1 62 RGHFAVDEDDLIIRLHRVLGNR-WSLIAGRIP-GRTANDIKNYWNSYL 107 5677789*************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MGSPHGLRKG SWTEEEDNLL RKYVDEYGQG NWKHIPSKSG LNRCRKSCRL RWLNYLRPNI 60 KRGHFAVDED DLIIRLHRVL GNRWSLIAGR IPGRTANDIK NYWNSYLSKK IPSESKNTIS 120 LKTHNNGTNS AKDLEPSQGD FQSSSDRKTE REWEDDEEEV DDTTSFWRSL LLEGEFLESN 180 QLRVENKEMV MFEHDDFFQG LGDLVEVMEI LGGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-57	MYB family protein