PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080354.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 152aa    MW: 16864.4 Da    PI: 9.5626
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.53.6e-0649881054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++  L++l+ +      +K + a++L +A+eYI+ L
  XP_028080354.1 49 KERKEKLSERIGALQQLVSPY-----GKTDTASVLLEAMEYIRFL 88
                    78999**************99.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MQCVNFTREA TIEERTMMEH KRSPLSIDQS SLNTFSPKRH KADLSISSKE RKEKLSERIG  60
ALQQLVSPYG KTDTASVLLE AMEYIRFLHE QVKLLSAPYL QSTPTPKMQE AGPHSLRSKG  120
LCLVPISCTT GVASSNGADI WAPIKTTSPK FA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.37e-62bHLH family protein