PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080409.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 345aa    MW: 38190.5 Da    PI: 6.1743
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.86.2e-16179225455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_028080409.1 179 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 225
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MADLYGTNAR SSSLESEELP SFLHNLLYNS LASPISSCST VKDKHRQSFL SPPPPETITS  60
SSATNLFYRL PMFSDSDSRF RERASTAGSS MMVDSSVDFN FSYPGRGFMA DAREFTRNTF  120
SAACVVDSDG ITSSLKRKFA EENDFDDFGS DCKKGSDASE APVSPGLPRS SKRSRAAEVH  180
NLSEKRRRSR INEKMKALQN LIPNSNKTDK ASMLDEAIEY LKQLQLQVQM LSMRNGLSLH  240
PFCFPGSLHP TQLPQAGIRF SEGNEVLNTN GGADTFPRNQ EISMQAAFDL PNQCTPSNQP  300
NLLTPTTNIS NSETPFELDP SIQNHCAPFN HLTSSKELCR EDRLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.16e-48bHLH family protein