PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080415.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 270aa MW: 30271.3 Da PI: 8.1527

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	96.4	4.3e-30	14	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppG rF P++e+l+++yL++k ++++ ++vi+e+d+y+++P dLp + +++++wy ++ ++ + g r r + gyWk tg++ XP_028080415.1 14 LPPGSRFYPSEEQLLCYYLTHKNNDDHRFGFDVINEIDLYNFDPFDLPdAgcfrfGRGGRRRHWYCYVAARVLKDCGGR--RRAGGGYWKRTGRE 106 79******************999997778*************5477744222355688988888777766654..55689***** PP NAM 90 kevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128 ++v+ ++ +vg +k++vf g + +++++tdWvm ey+l XP_028080415.1 107 RDVVGGaaGKVVVGRRKSFVFCLGdSPKNAVRTDWVMYEYAL 148 97767888******983555678*******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MGDPRNPRPM SFSLPPGSRF YPSEEQLLCY YLTHKNNDDH RFGFDVINEI DLYNFDPFDL 60 PDAGCFRFGR GGRRRHWYCY VAARVLKDCG GRRRAGGGYW KRTGRERDVV GGAAGKVVVG 120 RRKSFVFCLG DSPKNAVRTD WVMYEYALID HPKASFILCR VFVKSHSRNN VSENVLSSCG 180 EESVATVRHV GIQHDGTFTS GIGETIVHDD NSVDRKNEVS RFPVGLVSEQ DDRMTAGAVV 240 LAGVQPPLSR QPSEPLEVNC PIVMFILCSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	98	GGRRRAGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	3e-26	NAC family protein