PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080417.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 234aa MW: 26676.1 Da PI: 9.6938

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.8	2.9e-21	93	152	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Le l++ r+p+ae++e+++++l +++ ++V++WFqN++a+e++ XP_028080417.1 93 TRWNPTTEQIGILEMLYRGgMRTPNAEQIEQITAQLgkygKIEGKNVFYWFQNHKARERQ 152 7***************99************************************97 PP
2	Wus_type_Homeobox	119.4	1.6e-38	93	154	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi iLe+ly+ G+rtPn+e+i++ita+L +yGkie+kNVfyWFQN+kaRerqkq XP_028080417.1 93 TRWNPTTEQIGILEMLYRGGMRTPNAEQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQ 154 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MESSMKVHQF ARGFWVHEPS SLTLGCKRLR PLVPKHSNNN NNSSSDSTIT AASFDLKSFI 60 RPQTVSPTKP LRRSEDMGET TQNVQVETQP GGTRWNPTTE QIGILEMLYR GGMRTPNAEQ 120 IEQITAQLGK YGKIEGKNVF YWFQNHKARE RQKQKRNSAS LLGLGHCTRS IPATTIATIT 180 LDTSTRGQVE REEESPNKRK CRTWVLESLE EDKRYCKEEG DKTLELFPLH PEGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	4e-69	WOX family protein