PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028080424.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 168aa    MW: 18773.4 Da    PI: 4.5426
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028080424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.3e-052648123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ Fs+   L  H++ H
  XP_028080424.1 26 YTCTFCKRGFSNAQALGGHMNIH 48
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEFNQPTKES PDQIVYTSDD HQVRSYTCTF CKRGFSNAQA LGGHMNIHRK DRAKLKEYSG  60
DMTDKKATPS DHLIVDEDDS KLDGSEEKSC NSPKRPWIFS GEDEDGSRSG DGVGEPRKLD  120
LFVETPLVRD DAEASSDVSE DVERREKLSH GSSNIELDLE LRLGFGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.17e-18C2H2 family protein