PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080447.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 255aa MW: 29126.8 Da PI: 9.9673

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.8	8.3e-16	102	161	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ + +Aa+a++ a++k++g XP_028080447.1 102 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEAKAARAYDLAALKYWG 161 78*****************988886678446******99***********98 PP
2	AP2	22.8	2.2e-07	206	236	3	36
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 y+GV+++++ grW A+I + +k +lg+f XP_028080447.1 206 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 236 9*************988532...5*****9 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MAEDDFSVMK NWVSRNYYPA SHALDNGVES GSMSALGYWD LESLSLSMSP GSQSSCVTGS 60 QQISPTVTEC VAMEGKKRGS EKLDQKQVVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL 120 WDNSCKKEGQ SRKGRQVYLG GYDMEAKAAR AYDLAALKYW GPSTHINFPL ENYQQELEHM 180 KNMTRQEYVA HLRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSEFL 240 CIFSIYLGKN LKLNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	2e-92	AP2 family protein