PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080503.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 400aa MW: 44868.5 Da PI: 6.9368

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.1e-51	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL +k++++ l++ e ik+vdiyk++PwdLp+ ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_028080503.1 14 MLPGFRFHPTDEELVGFYLIRKIQHRALPI-ELIKQVDIYKYDPWDLPNLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579*************************.89***********8888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_028080503.1 108 dGTKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDEKSESDKM DDVMLPGFRF HPTDEELVGF YLIRKIQHRA LPIELIKQVD IYKYDPWDLP 60 NLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPSISEPVSP KKIFDKNLPP NDSWAICRIF KKTTSMAQRA 180 LSHSWISPIP ETTASDIFTQ GAHSTRFSET MSCTTEIGST IQLCSNNDLH QVSTASFSAL 240 DIPSYKPMNP TLGKSSPFSV PNGDLPSGFM FSPLEPTTKN TNDVNSMLFN LSPALIGDVN 300 KTSESIDFEG QQLQFNGFST SSPQDMQGSI GNEEDHMGLR KIPSAGHGNN QWGSVRSIGF 360 PFSLPSNLPD AWKPSNLPWD SPPYPSEMST TYSTNKCYID

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDEKSESDKM DDVMLPGFRF HPTDEELVGF YLIRKIQHRA LPIELIKQVD IYKYDPWDLP  60
NLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSDGT KCIGLKKSLV  120
FYRGRAAKGI KTDWMMHEFR LPSISEPVSP KKIFDKNLPP NDSWAICRIF KKTTSMAQRA  180
LSHSWISPIP ETTASDIFTQ GAHSTRFSET MSCTTEIGST IQLCSNNDLH QVSTASFSAL  240
DIPSYKPMNP TLGKSSPFSV PNGDLPSGFM FSPLEPTTKN TNDVNSMLFN LSPALIGDVN  300
KTSESIDFEG QQLQFNGFST SSPQDMQGSI GNEEDHMGLR KIPSAGHGNN QWGSVRSIGF  360
PFSLPSNLPD AWKPSNLPWD SPPYPSEMST TYSTNKCYID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-106	NAC family protein