PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028080652.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 608aa MW: 70520.8 Da PI: 8.0678

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028080652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86	5.8e-27	11	99	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rk++ +ks ++ eit+rtfvCskeg r+++k++ r++raetrtgC a + +k+ + gk++v+++++ HnH+l+ XP_028080652.1 11 EFYNSYGGRVGFSIRKEYAHKS-KTSEITSRTFVCSKEGLRKSDKRD-FAVRTSRAETRTGCGALMSIKLIRqIGKYRVINFVETHNHPLV 99 6******************9.5556*************999.999***************9989*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MEFNSKQSAY EFYNSYGGRV GFSIRKEYAH KSKTSEITSR TFVCSKEGLR KSDKRDFAVR 60 TSRAETRTGC GALMSIKLIR QIGKYRVINF VETHNHPLVV SACAHMLPSQ RKISTSQYIE 120 IDLADDCGTP LRSSYELMGR ELDTEEQITN IFWADATMII DYGQFGDVVT FDTTYKINRE 180 SRPFVIFVGF NNHRETIVFG AALMYDETTD SFIWLFKKFL EAMSNKHSKT IFTDQDAAMA 240 KAISYVMPNT YHRLCTWHMM QNAVKHMSGI FSGPGGVRSV LGKFIDEYEE EEEFFAAWNA 300 MLDEFDVHDN SWLQSIFHLR KIWVRAYVRW TWSVGMKSTQ LSESLNADLK EYLRSDYNLI 360 QFFIHFERVL NEKRYKEYEA EYALSYKLPR IKVQVLMLTQ AGDVYTKTIF EEFQDEYVGS 420 LELYVANCVH KDDCLVCIVK AYRQSTMREV KKDKDGNLSC SCRLFEMKGI LCSQVIKVFK 480 DEMIIIEIPS QYILKRWTKL ARAEIVQDYK GRDIQADPKL EQSSRYKSLC SLFTMISSQA 540 SELEKTYEDC VQEGKKLLAF VQNKLRIRIT NGPLNLNDAS STMRMNEGSE NVIQAKGLKK 600 RIDPICGR

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MEFNSKQSAY EFYNSYGGRV GFSIRKEYAH KSKTSEITSR TFVCSKEGLR KSDKRDFAVR  60
TSRAETRTGC GALMSIKLIR QIGKYRVINF VETHNHPLVV SACAHMLPSQ RKISTSQYIE  120
IDLADDCGTP LRSSYELMGR ELDTEEQITN IFWADATMII DYGQFGDVVT FDTTYKINRE  180
SRPFVIFVGF NNHRETIVFG AALMYDETTD SFIWLFKKFL EAMSNKHSKT IFTDQDAAMA  240
KAISYVMPNT YHRLCTWHMM QNAVKHMSGI FSGPGGVRSV LGKFIDEYEE EEEFFAAWNA  300
MLDEFDVHDN SWLQSIFHLR KIWVRAYVRW TWSVGMKSTQ LSESLNADLK EYLRSDYNLI  360
QFFIHFERVL NEKRYKEYEA EYALSYKLPR IKVQVLMLTQ AGDVYTKTIF EEFQDEYVGS  420
LELYVANCVH KDDCLVCIVK AYRQSTMREV KKDKDGNLSC SCRLFEMKGI LCSQVIKVFK  480
DEMIIIEIPS QYILKRWTKL ARAEIVQDYK GRDIQADPKL EQSSRYKSLC SLFTMISSQA  540
SELEKTYEDC VQEGKKLLAF VQNKLRIRIT NGPLNLNDAS STMRMNEGSE NVIQAKGLKK  600
RIDPICGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-93	FAR1 family protein