PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081011.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 230aa    MW: 26675.5 Da    PI: 4.7722
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-172469148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+ T+ Ed+l+ +++++lG++ W++Ia++++ gRt++++k++w+++l
   XP_028081011.1 24 RGKYTKAEDDLIMELHEKLGNK-WSAIAAKFP-GRTDNEIKNHWHTHL 69
                     899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSLSRCGKSC RLRWMNYLRP NVKRGKYTKA EDDLIMELHE KLGNKWSAIA AKFPGRTDNE  60
IKNHWHTHLK KRINENHSTF ELKQKAIQIS QSLANLELQS HDSPRSEINH VTDELGSKDV  120
TDEIYQQILE SSPLSSQELS SSDFSSSMTP DYALLSDKNW VGEDSMSSSE SFEESVRNFW  180
IELAFEDFSY QQNEFSSNLA EGESTFPCFL DHDDDSIEWF HQILKELPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.19e-37MYB family protein