PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081221.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 301aa    MW: 33790.1 Da    PI: 9.1643
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.61.7e-34100155458
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                     + YkeClkNhAaslGghavDGCgEfmps+++  +++++lkCaACgCHRnFHRre+e
  XP_028081221.1 100 AAYKECLKNHAASLGGHAVDGCGEFMPSPTSIsTDPTSLKCAACGCHRNFHRREPE 155
                     68**************************9999899******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGNLICLLTE QKEILQDFKK SEIKVVLHEQ NGLIAAIVAH PTIIDEIKQR QGEDKFFKKI  60
IGEIEVNPKP RHCHSRPHNH RHRHRHLNGP PPPPPPPAVA AYKECLKNHA ASLGGHAVDG  120
CGEFMPSPTS ISTDPTSLKC AACGCHRNFH RREPEDLPPP STAQHVIEYQ PQHRHXPPVL  180
PRSLNSASPT PISSAYYPSA PHMLLALSAG LSGQVLTENR PVNSSRTGNP NGRKRHRTNF  240
TQDQKERMLE FAERVGWKTQ KKDDEVITEC CSNVGVGRGV FKELERERER ERNNLKGSFV  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.15e-47ZF-HD family protein