PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081260.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NAC
Protein Properties Length: 303aa    MW: 34474.4 Da    PI: 7.8925
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.11.2e-51111351129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deel+++yL kkv+  +++l   + evd++k+ePwd+p+++  + kewyf+s rd+kyatg r+nrat sgyWkatgkd+++++ 
  XP_028081260.1  11 LPPGFRFHPRDEELICDYLMKKVTCCECPL---MIEVDLNKCEPWDIPETACVGGKEWYFYSLRDRKYATGLRTNRATVSGYWKATGKDRPIIR- 101
                     79*************************999...789************7777799**************************************9. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +g+lvg++ktLvfy+grapkg+ktdWvmhe+rle
  XP_028081260.1 102 RGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 135
                     999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MSNLSTVESK LPPGFRFHPR DEELICDYLM KKVTCCECPL MIEVDLNKCE PWDIPETACV  60
GGKEWYFYSL RDRKYATGLR TNRATVSGYW KATGKDRPII RRGTLVGMRK TLVFYQGRAP  120
KGRKTDWVMH EFRLEGPLGP PKTSNSVKED WVLCRMFFKN REVAAKQGTG SIYDDTRSSS  180
LPPLMDSYIT FDQTNTNEYH DYEQVPCFSI FTPNQTTPTF SHLTHMDPNM STKSTPPTFG  240
ATMPDLGTCL SPFSCDKKVI KVVLDQLTKM DPNPIFKGSP SFGEGSSESF LSDVVLPSMW  300
NHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-109NAC family protein