PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081268.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 241aa    MW: 27311.2 Da    PI: 6.7136
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.32e-06181204327
                     S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                     t+ C++f + G+Ck+G++C++ Hg+
  XP_028081268.1 181 TKACHYFNK-GFCKHGSNCRYFHGQ 204
                     889******.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDSFEASNIV FSRIRKFEPE NVTKKIIGYL LLQDRGHEMI RLAFGPDTLI HNLIYKTKIQ  60
LGLESKPVVS PPISPSMNLA KPVVSPPISP SMNPGFNPFS PVSSPVTLKV PYPSWDPQVN  120
PDHQPMHNPH FILQNQTQFM GLDYQLEPVN PGISAFSSDY YYPEATCARS PWSPTLSEFP  180
TKACHYFNKG FCKHGSNCRY FHGQPFPESL TQMFSPSTND VVNEDLIFSP RSLEKLEFEI  240
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