PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081375.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 92aa MW: 10781.3 Da PI: 9.9047

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	27	1.1e-08	37	76	11	46
AP2 11 krgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaa 46 ++gr++A+++d ++n k+ ++++lg ++ eeAa+++ XP_028081375.1 37 WTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDD-EEAAAQR 76 79*******999955656446********.9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 92 aa Download sequence
MIMKFILRLK NKDSKFMHVS SFKDNQLLPT LVILASWTGR YEAHLWDKNC WNESQNKKGR 60 QVYLGAYDDE EAAAQRQTAS LLVSSHESRH LR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-18	AP2 family protein