PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081437.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 472aa MW: 53026.6 Da PI: 9.2606

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	58.9	1.1e-18	209	261	1	54
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+r+ Wt LH++Fv+av+ L G ekA+Pk+il++m+ + + ++ v+SHL + R XP_028081437.1 209 KKRVIWTAVLHNKFVNAVQLL-GVEKAVPKKILQIMNEPMIPRSSVASHLYRCR 261 68*****************.**************************7766 PP
2	Response_reg	75.4	2.1e-25	30	138	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++++ +l+k +y +v+++++++eal++l++++ +D++++D+ m +m+G+ell+ i e ++p+i+++a+ ++e++ + + G XP_028081437.1 30 VLVVDDNVVCLKVVAALLNKCRY-KVTVTTKATEALKMLRKNKesYDIVITDVIMLDMNGFELLEIIGLEM-DMPVIMMSANYDQELVMKGVTHG 122 89*******************.***********888889****************996644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp+ ee+ + XP_028081437.1 123 ARDYLIKPVRLEEVKN 138 *******9999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MSKIDVHVSL NRAAPPQSRV DANFPEGLRV LVVDDNVVCL KVVAALLNKC RYKVTVTTKA 60 TEALKMLRKN KESYDIVITD VIMLDMNGFE LLEIIGLEMD MPVIMMSANY DQELVMKGVT 120 HGARDYLIKP VRLEEVKNIW QHVVRKNLFN TMKFGTMQAR ANQNPPIPSS KRQREKSNEE 180 EEEEEEQEQD DETNTHSNEE SSAQKKKKKK RVIWTAVLHN KFVNAVQLLG VEKAVPKKIL 240 QIMNEPMIPR SSVASHLYRC RNALRKENTK AKMSQESKDN IDSNKTNGLL SDTITTSCIN 300 QGLNTINHHN RFAEQYMSTG ITSFGSRLQT FGASTSNATL LQQNQLPPKV VADQMRPTVL 360 GSVSPSPFFE LNGMRFHSIN SGAKMFDDNV KMSSSQLPSF NTGQSGPSGM PVGFGPYSSF 420 SNAWSCFKSI ESNFRPDSLA MLLPWQHEGR NLANLKVKEE PIDSIQKGQF PG

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MSKIDVHVSL NRAAPPQSRV DANFPEGLRV LVVDDNVVCL KVVAALLNKC RYKVTVTTKA  60
TEALKMLRKN KESYDIVITD VIMLDMNGFE LLEIIGLEMD MPVIMMSANY DQELVMKGVT  120
HGARDYLIKP VRLEEVKNIW QHVVRKNLFN TMKFGTMQAR ANQNPPIPSS KRQREKSNEE  180
EEEEEEQEQD DETNTHSNEE SSAQKKKKKK RVIWTAVLHN KFVNAVQLLG VEKAVPKKIL  240
QIMNEPMIPR SSVASHLYRC RNALRKENTK AKMSQESKDN IDSNKTNGLL SDTITTSCIN  300
QGLNTINHHN RFAEQYMSTG ITSFGSRLQT FGASTSNATL LQQNQLPPKV VADQMRPTVL  360
GSVSPSPFFE LNGMRFHSIN SGAKMFDDNV KMSSSQLPSF NTGQSGPSGM PVGFGPYSSF  420
SNAWSCFKSI ESNFRPDSLA MLLPWQHEGR NLANLKVKEE PIDSIQKGQF PG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	211	KKKKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-61	ARR-B family protein