PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028081479.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 301aa    MW: 32046.2 Da    PI: 6.6383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028081479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.2e-10150194554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L++l+P+ +      K + a++L + v+Y+k L
  XP_028081479.1 150 HSIAERLRRERIAERIRALQDLVPSvN------KTDRAAMLDEIVDYVKFL 194
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MANNPSDGST DDFLEQILGF PSYPTTENNL AANDPSLAGA SAPMMLQLSS GDASHHLVGG  60
GGGGGGGGGF HGGGVFPLGL SLDQGKPGFM KMDKANNRFR EDVVDGRVSS SSVKNAFPGQ  120
TMPNTVAAVP HPPSIRPRVR ARRGQATDPH SIAERLRRER IAERIRALQD LVPSVNKTDR  180
AAMLDEIVDY VKFLRLQVKV LSMSRVGAAG AVAPLVTDIP ISSVEEETSE GGRNQLAWEK  240
WSNDGTERQV AKLMEENVGS AMQFLQSKAL CIMPISLASA IYHTQPPEAT TVVKPETHPP  300
S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155160RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-104bHLH family protein