PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082142.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 101aa    MW: 11374.4 Da    PI: 8.9271
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.5e-081657342
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcks 42
                     +WT+e  +++ +a + + ++   +W  Iar +g g++++++k 
   XP_028082142.1 16 SWTPEQNKQFERALAYFDKDtpdRWQNIARAVG-GKSAEEVKR 57
                     7********************************.*******95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MASNSFSSSR SSSGSSWTPE QNKQFERALA YFDKDTPDRW QNIARAVGGK SAEEVKRLYE  60
ILEKDIMQIE TDQVPLPNYR STRSNGRGPG NEPRQSGGNY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-33MYB_related family protein