PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082196.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ERF

Protein Properties

Length: 219aa MW: 24041.3 Da PI: 7.4243

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	32.3	2.6e-10	51	84	15	54
AP2 15 WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++ + ++ k++r++lg+f+taeeAaka+++a ++ XP_028082196.1 51 FATR---YC---KKRRVWLGTFDTAEEAAKAYDQASILMN 84 4444...32...36********************976665 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MGLLHHLTSL PSSISCSYHS LSLSLSVQTW CNQRSSEVSG SVTGVLGYQR FATRYCKKRR 60 VWLGTFDTAE EAAKAYDQAS ILMNGRNAKT NFPIAQNSEG NLIDTTTISF TGLSETLREK 120 LQKSSKAPSP SLTCLRLDTE NSHIGVWQKH AGACSDSNWV MRVELDTKKK GKTVEGGALA 180 LPSLNSSPTL GGPKLKEEMD EEERIGLEMI EELLQMPCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15360.1	4e-40	ERF family protein