PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082307.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARR-B

Protein Properties

Length: 532aa MW: 59777.1 Da PI: 9.5716

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	68.6	1e-21	208	259	1	53
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k+r+ Wt LH++Fv+av+qL G +kA+Pk+il++m+ + +++ v+SHLQkY XP_028082307.1 208 KKRVSWTGVLHNKFVDAVRQL-GVDKAVPKKILDIMNEPEISRGSVASHLQKY 259 68*****************.***************************** PP
2	Myb_DNA-binding	26.3	1.8e-08	210	259	1	47
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r +WT ++ ++vdav+qlG + +k+I m+ ++ ++ s++qky XP_028082307.1 210 RVSWTGVLHNKFVDAVRQLGVDkaVPKKILDIMNePEISRGSVASHLQKY 259 679******************************99**********9 PP
3	Response_reg	79.5	1.1e-26	31	139	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + ++l++ +l+k +y +v+++++++eal++l++k+ +D++++D+ m +m+G+ell+ i e ++p+i+++a++++e++ + +k G XP_028082307.1 31 VLVVDDNVVCLKLVAALLNKCHY-KVTATTKATEALKMLRKKKkkYDIVITDVIMLDMNGFELLEIIDLEM-DMPVIMMSANDNKELVMKGVKHG 123 89*******************.***********777777****************998755.9****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a+d+l Kp ee+ + XP_028082307.1 124 ARDYLIKPLRLEEVKN 139 *******9999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MSKIEVVDVS LNRAAPPQSR VNANFPEGLR VLVVDDNVVC LKLVAALLNK CHYKVTATTK 60 ATEALKMLRK KKKKYDIVIT DVIMLDMNGF ELLEIIDLEM DMPVIMMSAN DNKELVMKGV 120 KHGARDYLIK PLRLEEVKNI WQHVVRKNLF NTTKYGTVQA GTYQNPPIPS SKRQRENRNE 180 EEKEEEEEEE EETNTHNEES SAKKKTKKKR VSWTGVLHNK FVDAVRQLGV DKAVPKKILD 240 IMNEPEISRG SVASHLQKYI NALRKENTKA KMSQESENNI NSNKTNGLLS NTITTSCINQ 300 GLNTINHHNR LAEQDMSTGI TSFGSQLQTF GASTSNAKLL QQNQLPPKVV EDQMRPTVLG 360 SVPPSPFFAT NPSPHHELNG MRFHSINSRT KMFGDNVKMS SSQLPSFNIG QSGPSNMPVS 420 FGPYSCPPAT FNLGSVSFQK LGDASNQLNP ISQPDSLAML LPWQHEGRKL ANLKVKEPID 480 SIRKAQFVQH RYPFENTERE INIHHNNSSS FPDDDLLSIV VKQFTKNSAP IL

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MSKIEVVDVS LNRAAPPQSR VNANFPEGLR VLVVDDNVVC LKLVAALLNK CHYKVTATTK  60
ATEALKMLRK KKKKYDIVIT DVIMLDMNGF ELLEIIDLEM DMPVIMMSAN DNKELVMKGV  120
KHGARDYLIK PLRLEEVKNI WQHVVRKNLF NTTKYGTVQA GTYQNPPIPS SKRQRENRNE  180
EEKEEEEEEE EETNTHNEES SAKKKTKKKR VSWTGVLHNK FVDAVRQLGV DKAVPKKILD  240
IMNEPEISRG SVASHLQKYI NALRKENTKA KMSQESENNI NSNKTNGLLS NTITTSCINQ  300
GLNTINHHNR LAEQDMSTGI TSFGSQLQTF GASTSNAKLL QQNQLPPKVV EDQMRPTVLG  360
SVPPSPFFAT NPSPHHELNG MRFHSINSRT KMFGDNVKMS SSQLPSFNIG QSGPSNMPVS  420
FGPYSCPPAT FNLGSVSFQK LGDASNQLNP ISQPDSLAML LPWQHEGRKL ANLKVKEPID  480
SIRKAQFVQH RYPFENTERE INIHHNNSSS FPDDDLLSIV VKQFTKNSAP IL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31920.1	1e-62	ARR-B family protein