PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082400.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 253aa    MW: 28213.6 Da    PI: 7.0639
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48e-11166213455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_028082400.1 166 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 213
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDQPAMINGD AFQSASAAPY NLAEIWPFRI NGGESGGALD LMKVRFGQSL DQFENASVNR  60
EVSGNDPMVL DHRLARSGGS RKRRDESPPE NESAKLVSTS IGNDIITNEC DGKRIKTERS  120
RDENFDYKAK AEANSSKPTE QNTKTHEPPK QDYIHVRARR GQATDSHSLA ERARREKISE  180
RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQHQVEFLS MKLEAVNSKV NPGIEGFPSK  240
DVRLLMEAYG RGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.21e-74bHLH family protein