PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082401.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 245aa    MW: 27892.2 Da    PI: 5.8788
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.91.2e-2192185290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 
                     fYn+YAk  GFs+rks+ +++ ++g++++r + Cs+eg+r +   +  +ek+r ++a tr+gCka+++++ +      gk++vt+++ +HnHela
  XP_028082401.1  92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDrvAEKSRAPKALTRVGCKAQFRIRYDAnageGGKYVVTHFVADHNHELA 185
                     *****************9999.666699999*********99877766899999***************9987667789**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MARAEVKREG DDYDIPNEAD DIRLMNESRV EPYHGCEVGP SNEEVTNMNV EDDGADVKKE  60
MVDDAYGNDM FGDVERAILE QKFDPVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPIYLDRVAE KSRAPKALTR VGCKAQFRIR YDANAGEGGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRNLN NVDKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD  240
LHNHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-22FAR1 family protein