PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082460.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 599aa MW: 70035.4 Da PI: 6.6158

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79	9.1e-25	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ + ++++r+e rtgC+a++++k ++ +k+ v++++++HnH ++ XP_028082460.1 31 DFYNTYGGRLGFSIRRGYVNKS-KDGQITSRQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARVVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.7788************9999.99***************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKDGQITSR 60 QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARVVIKWDR NIQKFFVSDF VEQHNHIFVP 120 AECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL NSAHRPFASF VGLNHHRETV VFGAALMYDE TADSFVWLFR RFLEAMSSKA 300 PKTIFTDQDA AMTKAITIFM PNTTHRLCTW HLMQNALRHA NSIFKDKAMK DKGMKSVLYT 360 FMYDIEDEEE FMLKWEEMLD KYEVTDNHWL KLTFEVKEKW GWPYVRNAWG AGMSSTQLSE 420 SFNAFLKDFI QSDHNLMQFF MHFDRVLSEK RYKELQAEYA LCQKLSRVNI KVKIMEQAAA 480 VYTNKIFEEF QDEYVKSLEV NIEEIENDGE STVLCSHCLK ILRERLNLKE IPSQYILKRW 540 TKKARSENVK DRCGHDIQVD VRLHQTSCYR SLMAIFISVA CRASESEETY NLTVEKAEN

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKDGQITSR  60
QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARVVIKWDR NIQKFFVSDF VEQHNHIFVP  120
AECTHMLPSQ RKISASQATE IDLAEKSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGLNHHRETV VFGAALMYDE TADSFVWLFR RFLEAMSSKA  300
PKTIFTDQDA AMTKAITIFM PNTTHRLCTW HLMQNALRHA NSIFKDKAMK DKGMKSVLYT  360
FMYDIEDEEE FMLKWEEMLD KYEVTDNHWL KLTFEVKEKW GWPYVRNAWG AGMSSTQLSE  420
SFNAFLKDFI QSDHNLMQFF MHFDRVLSEK RYKELQAEYA LCQKLSRVNI KVKIMEQAAA  480
VYTNKIFEEF QDEYVKSLEV NIEEIENDGE STVLCSHCLK ILRERLNLKE IPSQYILKRW  540
TKKARSENVK DRCGHDIQVD VRLHQTSCYR SLMAIFISVA CRASESEETY NLTVEKAEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-121	FAR1 family protein