PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082477.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 337aa    MW: 36409.4 Da    PI: 6.8772
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.7e-11101145347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
   XP_028082477.1 101 PWTEEEHRMFLIGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 145
                      7*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTHYTGS NTGTPQNGVS  60
GHNDSPGGDT PDHGGAAEDG YGSEDFVPGS SSSRERKKGI PWTEEEHRMF LIGLQKLGKG  120
DWRGISRNYV ISRTPTQVAS HAQKYFIRQC NVSRRKRRSS LFDIVADESV DTLVASHDFF  180
AVNTPQAETQ TNNPLPAPPA LDEECESMDS ANSNDVEPVL QKPDSSQCCY PVLFPAYVSP  240
PFLPFSVPFW PGHNMEPAKA ETHEVLKPTA VHSKSPINVD ELVGMSKLSL GESLGNAGPS  300
SLSLKLLEGS TRQSAFHANP GSDSSLVDSS INPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-125MYB_related family protein