PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082513.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 328aa MW: 38741.3 Da PI: 8.0681

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.7	9.3e-24	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn Y+ ++GFs+r++ +k+k +++ ++r +vC+ke +r+ +k++ ++++raetrtgC+a+l vk+++ +gk++v++++++H H+l+ XP_028082513.1 25 DFYNIYGGRMGFSIRRDFCRKNKVTNQLICRLLVCNKERFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDEgTGKYVVADFKEKHDHDLF 114 6*****************************************999.999***********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEPENDCAWK PKQGMTFDSE QCVYDFYNIY GGRMGFSIRR DFCRKNKVTN QLICRLLVCN 60 KERFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDEGTGKY VVADFKEKHD HDLFGDVVTF 120 DTTYKLNKEH RPFASFVGFN HHRETVIFGA ALLYNETAES FVWLFQNFLE AMSGKAPKTL 180 FTDQDAAMAK AILIVMPDTT HRLCTWHLMQ NALKHVNYLF QDKGVKGVLN KFFFDIEDTN 240 QWKLEWAKML DKYDAHENHW LKLTFAVKEK WGWPYVRSTW AAGMSTIQLS ESFNALLKDY 300 IRSDFNLNEF FMHFEMVLYE KRYKELEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-47	FAR1 family protein