PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082528.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 219aa MW: 25481.6 Da PI: 8.5934

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082528.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75	1.6e-23	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +k+k+ + it+r fvC+keg+r +k++ ++++r+e rtgC+a+l +k ++ +k+ v +++++HnH ++ XP_028082528.1 31 NFYNAYGGRMGFSIRRGYVNKNKEAQ-ITSRLFVCNKEGFRGVDKRD-PLTKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHNHIFV 119 6******************96666.*************999.999**************999899***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEAQITSR 60 LFVCNKEGFR GVDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFVGEF VEQHNHIFVP 120 TECTHMLPSQ RKISASQATE IDLAEKSRIR LNAAFELMGN EAGGRESLGF TKVDQKNYLR 180 MKRQNSLAYG EAGSILQYFR EKTLENPSFF YSVQLDSEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-37	FAR1 family protein