PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082616.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 232aa    MW: 25965.9 Da    PI: 4.7662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.8e-18100150255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  XP_028082616.1 100 SYRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFAMRG 150
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MDCSVFHSLS SDFSPDSSLF HSLNSDFSPD SSFGSPESFS WNGLDFANYL PFNENDSEEM  60
LLLGVLAEAA QEISETVSTD QIKEDEVSSK SEAKPKKEKS YRGVRRRPWG KFAAEIRDST  120
RNGIRVWLGT FDSAEAAALA YDQAAFAMRG QAAILNFPVE RVQESLREMR YSMEEGCSPV  180
VAMKKRHSMR RRSVSRKSKV REAKTENVVV LEDLGAEYLE ELLSSTECAS PC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-52ERF family protein