PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028082673.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 398aa    MW: 45446.9 Da    PI: 6.5531
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028082673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.91.4e-0792128239
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 
                     fYn+YAk  GFs+++s+ +++ ++g++++r + Cs+e 
  XP_028082673.1  92 FYNAYAKAKGFSIQRSRFNTN-KEGKVISRLWLCSRED 128
                     9****************9999.666699999****985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MARAEVKREG DDYDISNEAN VIRLMNESRV EPYHGCEAGP SNEEATNMNI GDGGADVKKE  60
MVYDAHGNDM VGDVERAILE QKFDSVEDGK AFYNAYAKAK GFSIQRSRFN TNKEGKVISR  120
LWLCSREDAG EGRKYVVTHF VADHNHELAK QHCVMYLRSH RSLNSADKAQ AMALHNVGVK  180
TSQIMNYMVN QSRSYENVGF VRTDLHNHIE AERRAEVEDG DAQGALVYLC AKLDVDPRFF  240
YKYDVCNDNK LQNLFWADSK SQADYAKFAN ETIKTYTWVL ETFMEAMGNK APVSVLTDGD  300
KAMREAIRRV FPDARHRLCN WHLGKNAGSN VHISGFAHAF KQCMDMETDE TKFEHGWTTM  360
VEKFGLQTNS WVLETHEKHH MWAEAYMRGH FFAGMKST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.13e-48FAR1 family protein