PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082702.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 353aa MW: 41451.4 Da PI: 8.1662

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.5	3.1e-25	66	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y++++GF +r++ +k+k +++ ++r +vC+keg+++ +k++ ++++r+etrtgC+a+l vk+++ +gk++v++++++HnH+l+ XP_028082702.1 66 DFYNTYGERMGFGIRRDFCRKNKFTNQLICRLLVCNKEGFQKVDKRD-PLAKNPRVETRTGCEARLYVKLDEgTGKFVVIDFKEKHNHDLV 155 6*****************************************999.999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MNISKEKSSI RGLEAQDVGR SLETKKKRKD PQQHKLHFHM DMELENDCAW KPKQGMTFDS 60 EQCVYDFYNT YGERMGFGIR RDFCRKNKFT NQLICRLLVC NKEGFQKVDK RDPLAKNPRV 120 ETRTGCEARL YVKLDEGTGK FVVIDFKEKH NHDLVSPECA HMLPSQKKIS TTQLDNEEQI 180 TNMFWTDAQM IMDYTQFGDV VTFDTTYKLN KKHRPFASFV EFNHHRETVI FGTTLLYDET 240 TESFVWLFQN FLEAMSGKAP KTLFTDQDAA MAKAIPIVIP NTSHRLCTWH LMQNALKHVN 300 CLFQDKGVKG VLNKFFFDIE DANQWKLEWA KILDKYDAHE NHWLKLTFAV KEK

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MNISKEKSSI RGLEAQDVGR SLETKKKRKD PQQHKLHFHM DMELENDCAW KPKQGMTFDS  60
EQCVYDFYNT YGERMGFGIR RDFCRKNKFT NQLICRLLVC NKEGFQKVDK RDPLAKNPRV  120
ETRTGCEARL YVKLDEGTGK FVVIDFKEKH NHDLVSPECA HMLPSQKKIS TTQLDNEEQI  180
TNMFWTDAQM IMDYTQFGDV VTFDTTYKLN KKHRPFASFV EFNHHRETVI FGTTLLYDET  240
TESFVWLFQN FLEAMSGKAP KTLFTDQDAA MAKAIPIVIP NTSHRLCTWH LMQNALKHVN  300
CLFQDKGVKG VLNKFFFDIE DANQWKLEWA KILDKYDAHE NHWLKLTFAV KEK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	25	53	KKKRKDPQQHKLHFHMDMELENDCAWKPK
2	26	54	KKKRKDPQQHKLHFHMDMELENDCAWKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	4e-45	FAR1 family protein