PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082705.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 408aa MW: 47472.8 Da PI: 6.9046

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.2	3.1e-24	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ +++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028082705.1 31 DFYNTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLIKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.6666************9999.999**************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR 60 QFVCNKEGFR VVDKRDPLIK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP 120 AECTHMLPSP RKISASQATE IDLAEKSEIG LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 MKRQNSLAYG EAGSILQYFC DKSLENPSFF YSVQLDNEEQ ITNIFWANAQ MIMDYGQFGD 240 AVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGATSMYDE TTDSFIWLFK RFLEAISSKA 300 PKIIFMDQNV AMAKAIPIVV PNTTHRLCTW HLMQNALRHA NSIFKDKAVK DKGMKSVLST 360 LMYDIEDEEE FTLKWEEMLD KYEVRDNHWL KLTFGIKEKW GWPYVRNA

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLIK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP  120
AECTHMLPSP RKISASQATE IDLAEKSEIG LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
MKRQNSLAYG EAGSILQYFC DKSLENPSFF YSVQLDNEEQ ITNIFWANAQ MIMDYGQFGD  240
AVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGATSMYDE TTDSFIWLFK RFLEAISSKA  300
PKIIFMDQNV AMAKAIPIVV PNTTHRLCTW HLMQNALRHA NSIFKDKAVK DKGMKSVLST  360
LMYDIEDEEE FTLKWEEMLD KYEVRDNHWL KLTFGIKEKW GWPYVRNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-89	FAR1 family protein